2010 Biophysics Student Publications

2010 Publications:

Leslie SR, Fields AP, Cohen AE. 2010. Convex Lens-Induced Confinement for Imaging Single Molecules. Anal. Chem. 82, 6224-6229.

Fields AP, Cohen AE. 2010. Anti-Brownian traps for studies on single molecules. Methods in Enzymology. 475, 149-174.

Liu S, Harada BT, Miller JT, Le Grice SF, Zhuang X. 2010. Initiation Complex Dynamics Direct the Transitions Between Distinct Phases of Early HIV Reverse Transcription. Nat. Struct. Mol. Biol. 17(12): 1453-60.

Hill AL, Rand DG, Nowak MA, Christakis NA. 2010. Emotions as infectious diseases in a large social network: the SISa model. Proc Biol Sci. 277(1701):3827-35.

Hill AL, Rand DG, Nowak MA, Christakis NA. 2010. Infectious disease modeling of social contagion in networks. PLoS Comput Biol. 6(11):e1000968.

Jordan DM, Ramensky VE, Sunyaev SR. 2010. Human Allelic Variation: Perspective from Protein Structure, Function, and Evolution. Curr. Opin. Struct. Biol. 20:342-50. 

Fang-Yen C, Wyart M, Xie J, Kawai R, Kodger T, Chen S, Wen Q, Samuel AD. 2010. Biomechanical Analysis of Gait Adaptation in the Nematode Caenorhabditis Elegans. Proc Natl Acad Sci USA. 107(47):20323-8.

Kueh HY, Brieher WM, Mitchison TJ. 2010. Quantitative analysis of actin turnover in Listeria comet tails: evidence for catastrophic filament turnover. Biophys J. 99(7):2153-62.

Mao Y, Xu X, Xu W, Ishida Y, Leal WS, Ames JB, Clardy J. 2010. Crystal and solution structures of an odorant-binding protein from the southern house mosquito complexed with an oviposition pheromone. Proc Natl Acad Sci USA. 107(44):19102-7.

Liong M, Shao H, Haun JB, Lee H, Weissleder R. 2010. Carboxymethylated polyvinyl alcohol stabilizes doped ferrofluids for biological applications. Adv Mater. 22(45):5168-72.

Sommer MO, Church GM, Dantas G. 2010. A functional metagenomic approach for expanding the synthetic biology toolbox for biomass conversion. Mol Syst Biol. 6:360.

Sommer MO, Church GM, Dantas G. 2010. The human microbiome harbors a diverse reservoir of antibiotic resistance genes. Virulence. 1(4):299-303.

Tan RZ, van Oudenaarden A. 2010. Transcript counting in single cells reveals dynamics of rDNA transcription. Mol Syst Biol. 6:358.

Tsang JS, Ebert MS, van Oudenaarden A. 2010. Genome-wide dissection of microRNA functions and cotargeting networks using gene set signatures. Mol Cell. 38(1):140-53.

Reiner T, Earley S, Turetsky A, Weissleder R. 2010. Bioorthogonal Small Molecule Ligands for PARP1 Imaging in Living Cells. Chembiochem. 11(17):2374-7.

Zaranek AW, Levanon EY, Zecharia T, Clegg T, Church GM. 2010. A survey of genomic traces reveals a common sequencing error, RNA editing, and DNA editing. PLoS Genet. 6(5):e1000954.