#  2011 Biophysics Student Publications 

 



 ##  

  expand\_more  

 
  

 

**2011 Publications:**

Shea J, **Agarwala V, Philippakis AA,** Maguire J, Banks E, Depristo M, Thomson B, Guiducci C, Onofrio RC, Kathiresan S, Gabriel S, Burtt NP, Daly MJ, Groop L, Altshuler D; Myocardial Infarction Genetics Consortium. 2011. Comparing Strategies to Fine-map the Association of Common SNPs at Chromosome 9p21 with Type 2 Diabetes and Myocardial Infarction. Nat Genet. 43(8):801-5.

Catana C, Benner T, van der Kouwe A, Byars L, Hamm M, **Chonde DB,** Michel CJ, El Fakhri G, Schmand M, Sorensen AG. 2011. MR-assisted PET Motion Correction for Neurologic Studies in an Integrated MR-PET Scanner. J. Nucl Med. 52(1): 154-61.

Cohen AE, **Fields AP.** 2011. The Cat That Caught the Canary: What To Do with Single-Molecule Trapping. ACS Nano, 5, 5296-5299.

**Fields AP,** Cohen AE. 2011. Electrokinetic trapping at the one nanometer limit, PNAS, 108, 8937-8942.

**Fudenberg G,** Getz G, Meyerson M, Mirny LA. 2011. High-order Chromatin Architecture Shapes the Landscape of Chromosomal Alterations in Cancer. Nature Biotechnology 29(12): 1109-13.

Vázquez-Reina A, **Gelbart M,** Huang D, Lichtman J, Miller E, and Pfister H. 2011. Segmentation fusion for connectomics. *2011 International Conference on Computer Vision*, Barcelona, Spain, pp. 177-184.

Mammoto T, Mammoto A, Torisawa YS, Tat T, **Gibbs A,** Derda R, Mannix R, de Bruijn M, Yung CW, Huh D, Ingber DE. 2011. Mechanochemical Control of Mesenchymal Condensation and Embryonic Tooth Organ Formation. Dev Cell. 21(4): 758-769.

**Jordan DM,** Kiezun A, Baxter SM, Agarwala V, Green RC, Murray MF, Pugh T, Lebo MS, Rehm HL, Funke BH, Sunyaev SR. 2011. Development and Validation of a Computational Method for Assessment of Missense Variants in Hypertrophic Cardiomyopathy. American Journal of Human Genetics, [Volume 88, Issue 2](http://www.cell.com/AJHG/issue?pii=S0002-9297(11)X0002-2), 183-192.

Field CM, Wühr M, Anderson GA, **Kueh HY,** Strickland D, Mitchison TJ. 2011. Actin behavior in bulk cytoplasm is cell cycle regulated in early vertebrate embryos. J Cell Sci. 124(Pt 12):2086-95.

Mori M, **Monnier N,** Daigle N, Bathe M, Ellenberg J, Lénárt P. 2011. Intracellular Transport by an Anchored Homogeneously Contracting F-actin Meshwork. Curr. Biol. 21(7):606-11.

**Nichols AJ,** Evans CL. 2011. Video-rate Scanning Confocal Microscopy and Microendoscopy. J. Vis. Exp. (56), e3252.

Yoon TJ, Lee H, **Shao H,** Weissleder R. 2011. Highly magnetic core-shell nanoparticles with a unique magnetization mechanism. Angew Chem Int Ed Engl. 50(20):4663-6.

Yoon TJ, Lee H, **Shao H,** Hilderbrand SA, Weissleder R. 2011. Multicore assemblies potentiate magnetic properties of biomagnetic nanoparticles. Adv Mater. 23(41):4793-7.

**Tang H,** Kreiman G. 2011. Face recognition: vision and emotions beyond the bubble. Curr Biol. 21(21):R888-90.

Mukherji S, Ebert MS, Zheng GX, **Tsang JS,** Sharp PA, van Oudenaarden A. 2011. MicroRNAs can generate thresholds in target gene expression. Nat Genet. 43(9):854-9.

Keliher EJ, Reiner T, **Turetsky A,** Hilderbrand SA, Weissleder R. 2011. High-Yielding, Two-Step (18)F Labeling Strategy for (18)F-PARP1 Inhibitors. ChemMedChem. 6(3):424-7.

**Wang HH,** **Xu G,** Vonner A, Church GM. 2011. Modified Bases Enable High-efficiency Oligonucleotide-Mediated Allelic Replacement via Mismatch Repair Evasion. Nucleic Acids Res. 39(16):7336-47.